STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mda66Flavodoxin-like fold family protein; [R] COG2249 Putative NADPH-quinone reductase (modulator of drug activity B). (197 aa)    
Predicted Functional Partners:
kefB
Transporter, monovalent cation:proton antiporter-2 family protein; Pore-forming subunit of a potassium efflux system that confers protection against electrophiles. Catalyzes K(+)/H(+) antiport.
  
 
 0.843
ygiN
Antibiotic biosynthesis monooxygenase family protein; [S] COG1359 Uncharacterized conserved protein.
     
 0.788
mntE
cys/Met metabolism PLP-dependent enzyme family protein; [E] COG0436 Aspartate/tyrosine/aromatic aminotransferase.
   
    0.752
aat_1
Aminotransferase class I and II family protein; [E] COG0436 Aspartate/tyrosine/aromatic aminotransferase.
   
    0.752
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
    
  0.631
dapL
Aminotransferase class I and II family protein; [E] COG0436 Aspartate/tyrosine/aromatic aminotransferase.
   
    0.565
ydjA
Nitroreductase family protein; [C] COG0778 Nitroreductase.
 
  
 0.496
eptA
Conserved hypothetical protein; [R] COG2194 Predicted membrane-associated, metal-dependent hydrolase.
  
     0.434
rosB
2a37: transporter, monovalent cation:proton antiporter-2 family protein; [P] COG4651 Kef-type K+ transport system, predicted NAD-binding component.
   
 
 0.419
dld
FAD binding domain protein; Catalyzes the oxidation of D-lactate to pyruvate. Belongs to the quinone-dependent D-lactate dehydrogenase family.
  
     0.417
Your Current Organism:
Yersinia kristensenii
NCBI taxonomy Id: 28152
Other names: ATCC 33638, CCUG 11294, CCUG 8241, CIP 80.30, DSM 18543, JCM 7576, NCTC 11471, Y. kristensenii, strain 105
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