STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CH54_3206Hypothetical protein. (336 aa)    
Predicted Functional Partners:
flgL
flagell_flgL: flagellar hook-associated protein 3; [N] COG1344 Flagellin and related hook-associated proteins.
  
 
 0.852
flgK
flgK_ends: flagellar hook-associated protein FlgK; [N] COG1256 Flagellar hook-associated protein.
       0.673
CH54_3203
[MNO] COG3951 Rod binding protein.
       0.492
flgI_2
Flagellar P-ring family protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
       0.472
flgH_2
Flagellar L-ring family protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
       0.461
flgL-2
flagell_flgL: flagellar hook-associated protein 3; [N] COG1344 Flagellin and related hook-associated proteins.
  
 
 0.429
flgG
flgG_G_neg: flagellar basal-body rod protein FlgG; [N] COG4786 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
   
   0.421
CH54_3209
Hypothetical protein; Bacterial flagellin C-terminal helical region family protein; [N] COG1344 Flagellin and related hook-associated proteins.
  
 
 0.421
CH54_764
Hypothetical protein; Bacterial flagellin C-terminal helical region family protein; [N] COG1344 Flagellin and related hook-associated proteins.
  
 
 0.421
Your Current Organism:
Yersinia kristensenii
NCBI taxonomy Id: 28152
Other names: ATCC 33638, CCUG 11294, CCUG 8241, CIP 80.30, DSM 18543, JCM 7576, NCTC 11471, Y. kristensenii, strain 105
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