STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CH54_3209Hypothetical protein; Bacterial flagellin C-terminal helical region family protein; [N] COG1344 Flagellin and related hook-associated proteins. (425 aa)    
Predicted Functional Partners:
fliS-2
fliS: flagellar protein FliS; [NUO] COG1516 Flagellin-specific chaperone FliS.
 
 
 0.985
fliS
fliS: flagellar protein FliS; [NUO] COG1516 Flagellin-specific chaperone FliS.
 
 
 0.981
CH54_3210
[N] COG1345 Flagellar capping protein.
 
 
 0.963
flgK
flgK_ends: flagellar hook-associated protein FlgK; [N] COG1256 Flagellar hook-associated protein.
 
  
 0.962
fliG_2
fliG middle domain protein; [N] COG1536 Flagellar motor switch protein.
 
  
 0.939
flgC
flgC: flagellar basal-body rod protein FlgC; [N] COG1558 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
 
  
 0.933
fliG
Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
  
 0.933
fliD_1
Flagellar hook-associated family protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
 
 
 0.931
CH54_764
Hypothetical protein; Bacterial flagellin C-terminal helical region family protein; [N] COG1344 Flagellin and related hook-associated proteins.
  
  
 
0.929
flgC-2
flgC: flagellar basal-body rod protein FlgC; [N] COG1558 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
 
  
 0.927
Your Current Organism:
Yersinia kristensenii
NCBI taxonomy Id: 28152
Other names: ATCC 33638, CCUG 11294, CCUG 8241, CIP 80.30, DSM 18543, JCM 7576, NCTC 11471, Y. kristensenii, strain 105
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.