STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CH54_3337Conserved hypothetical protein; [S] COG3520 Uncharacterized protein conserved in bacteria. (365 aa)    
Predicted Functional Partners:
CH54_3335
impA-related N-terminal family protein; [S] COG3515 Uncharacterized protein conserved in bacteria.
 
  
 0.974
CH54_3339
Lysozyme family protein; Gene 25-like; [S] COG3518 Uncharacterized protein conserved in bacteria.
 
  
 0.971
CH54_3336
Conserved hypothetical protein; [S] COG3519 Uncharacterized protein conserved in bacteria.
 
  
 0.967
CH54_3338
Type VI secretion lipofamily protein; [S] COG3521 Uncharacterized protein conserved in bacteria.
 
  
 0.964
CH54_3325
vgr_GE: Rhs element Vgr family protein; [S] COG3501 Uncharacterized protein conserved in bacteria.
 
  
 0.944
CH54_3341
impA-related N-terminal family protein; [S] COG3515 Uncharacterized protein conserved in bacteria.
 
  
 0.942
CH54_3334
Intracellular multiplication and macrophage-killing family protein; [S] COG3523 Uncharacterized protein conserved in bacteria.
 
  
 0.936
CH54_3278
impA-related N-terminal family protein; [S] COG3515 Uncharacterized protein conserved in bacteria.
 
  
 0.926
CH54_3292
impA-related N-terminal family protein; [S] COG3515 Uncharacterized protein conserved in bacteria.
 
  
 0.910
CH54_3332
PAAR motif family protein; [S] COG4104 Uncharacterized conserved protein.
 
     0.910
Your Current Organism:
Yersinia kristensenii
NCBI taxonomy Id: 28152
Other names: ATCC 33638, CCUG 11294, CCUG 8241, CIP 80.30, DSM 18543, JCM 7576, NCTC 11471, Y. kristensenii, strain 105
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.