Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CH54_2470 | mscS | CH54_2470 | CH54_3394 | Hypothetical protein. | Mechanosensitive ion channel family protein; [M] COG0668 Small-conductance mechanosensitive channel. | 0.462 |
gcvP | mscS | CH54_3408 | CH54_3394 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Mechanosensitive ion channel family protein; [M] COG0668 Small-conductance mechanosensitive channel. | 0.681 |
kefB | mscS | CH54_2269 | CH54_3394 | Transporter, monovalent cation:proton antiporter-2 family protein; Pore-forming subunit of a potassium efflux system that confers protection against electrophiles. Catalyzes K(+)/H(+) antiport. | Mechanosensitive ion channel family protein; [M] COG0668 Small-conductance mechanosensitive channel. | 0.448 |
lysE | mscS | CH54_3395 | CH54_3394 | L-lysine exporter family protein; Involved in the export of arginine. Important to control the intracellular level of arginine and the correct balance between arginine and lysine; Belongs to the LysE/ArgO transporter (TC 2.A.75) family. | Mechanosensitive ion channel family protein; [M] COG0668 Small-conductance mechanosensitive channel. | 0.443 |
mscS | CH54_2470 | CH54_3394 | CH54_2470 | Mechanosensitive ion channel family protein; [M] COG0668 Small-conductance mechanosensitive channel. | Hypothetical protein. | 0.462 |
mscS | gcvP | CH54_3394 | CH54_3408 | Mechanosensitive ion channel family protein; [M] COG0668 Small-conductance mechanosensitive channel. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.681 |
mscS | kefB | CH54_3394 | CH54_2269 | Mechanosensitive ion channel family protein; [M] COG0668 Small-conductance mechanosensitive channel. | Transporter, monovalent cation:proton antiporter-2 family protein; Pore-forming subunit of a potassium efflux system that confers protection against electrophiles. Catalyzes K(+)/H(+) antiport. | 0.448 |
mscS | lysE | CH54_3394 | CH54_3395 | Mechanosensitive ion channel family protein; [M] COG0668 Small-conductance mechanosensitive channel. | L-lysine exporter family protein; Involved in the export of arginine. Important to control the intracellular level of arginine and the correct balance between arginine and lysine; Belongs to the LysE/ArgO transporter (TC 2.A.75) family. | 0.443 |
mscS | yrbG | CH54_3394 | CH54_3017 | Mechanosensitive ion channel family protein; [M] COG0668 Small-conductance mechanosensitive channel. | Sodium/calcium exchanger family protein; [P] COG0530 Ca2+/Na+ antiporter. | 0.539 |
yrbG | mscS | CH54_3017 | CH54_3394 | Sodium/calcium exchanger family protein; [P] COG0530 Ca2+/Na+ antiporter. | Mechanosensitive ion channel family protein; [M] COG0668 Small-conductance mechanosensitive channel. | 0.539 |