Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cof_1 | fadM | CH54_3696 | CH54_3693 | HAD hydrolase, IIB family protein; Catalyzes the hydrolysis of 4-amino-2-methyl-5- hydroxymethylpyrimidine pyrophosphate (HMP-PP) to 4-amino-2-methyl-5- hydroxymethylpyrimidine phosphate (HMP-P). | acyl-CoA thioester hydrolase, YbgC/YbaW family protein; [R] COG0824 Predicted thioesterase. | 0.513 |
| cof_1 | queC | CH54_3696 | CH54_3694 | HAD hydrolase, IIB family protein; Catalyzes the hydrolysis of 4-amino-2-methyl-5- hydroxymethylpyrimidine pyrophosphate (HMP-PP) to 4-amino-2-methyl-5- hydroxymethylpyrimidine phosphate (HMP-P). | Queuosine biosynthesis protein QueC; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family. | 0.419 |
| cof_1 | sgrR_2 | CH54_3696 | CH54_3695 | HAD hydrolase, IIB family protein; Catalyzes the hydrolysis of 4-amino-2-methyl-5- hydroxymethylpyrimidine pyrophosphate (HMP-PP) to 4-amino-2-methyl-5- hydroxymethylpyrimidine phosphate (HMP-P). | Bacterial extracellular solute-binding s, 5 Middle family protein; [R] COG4533 ABC-type uncharacterized transport system, periplasmic component. | 0.548 |
| fadM | cof_1 | CH54_3693 | CH54_3696 | acyl-CoA thioester hydrolase, YbgC/YbaW family protein; [R] COG0824 Predicted thioesterase. | HAD hydrolase, IIB family protein; Catalyzes the hydrolysis of 4-amino-2-methyl-5- hydroxymethylpyrimidine pyrophosphate (HMP-PP) to 4-amino-2-methyl-5- hydroxymethylpyrimidine phosphate (HMP-P). | 0.513 |
| queC | cof_1 | CH54_3694 | CH54_3696 | Queuosine biosynthesis protein QueC; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family. | HAD hydrolase, IIB family protein; Catalyzes the hydrolysis of 4-amino-2-methyl-5- hydroxymethylpyrimidine pyrophosphate (HMP-PP) to 4-amino-2-methyl-5- hydroxymethylpyrimidine phosphate (HMP-P). | 0.419 |
| queC | sgrR_2 | CH54_3694 | CH54_3695 | Queuosine biosynthesis protein QueC; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family. | Bacterial extracellular solute-binding s, 5 Middle family protein; [R] COG4533 ABC-type uncharacterized transport system, periplasmic component. | 0.622 |
| sgrR_2 | cof_1 | CH54_3695 | CH54_3696 | Bacterial extracellular solute-binding s, 5 Middle family protein; [R] COG4533 ABC-type uncharacterized transport system, periplasmic component. | HAD hydrolase, IIB family protein; Catalyzes the hydrolysis of 4-amino-2-methyl-5- hydroxymethylpyrimidine pyrophosphate (HMP-PP) to 4-amino-2-methyl-5- hydroxymethylpyrimidine phosphate (HMP-P). | 0.548 |
| sgrR_2 | queC | CH54_3695 | CH54_3694 | Bacterial extracellular solute-binding s, 5 Middle family protein; [R] COG4533 ABC-type uncharacterized transport system, periplasmic component. | Queuosine biosynthesis protein QueC; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family. | 0.622 |