Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CH54_44 | ccmA-8 | CH54_44 | CH54_3846 | Tetratricopeptide repeat family protein; [O] COG4235 Cytochrome c biogenesis factor. | Heme ABC exporter, ATP-binding protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | 0.453 |
| CH54_44 | ccmC | CH54_44 | CH54_3848 | Tetratricopeptide repeat family protein; [O] COG4235 Cytochrome c biogenesis factor. | Heme exporter CcmC family protein; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family. | 0.438 |
| CH54_44 | ccmE | CH54_44 | CH54_3850 | Tetratricopeptide repeat family protein; [O] COG4235 Cytochrome c biogenesis factor. | ccmE family protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family. | 0.417 |
| CH54_44 | ccmF-2 | CH54_44 | CH54_41 | Tetratricopeptide repeat family protein; [O] COG4235 Cytochrome c biogenesis factor. | nrfE: cytochrome c-type biogenesis protein CcmF; [O] COG1138 Cytochrome c biogenesis factor. | 0.947 |
| CH54_44 | ccmH_1 | CH54_44 | CH54_43 | Tetratricopeptide repeat family protein; [O] COG4235 Cytochrome c biogenesis factor. | Cytochrome C biogenesis family protein; Possible subunit of a heme lyase. | 0.949 |
| CH54_44 | ccmH_2 | CH54_44 | CH54_3853 | Tetratricopeptide repeat family protein; [O] COG4235 Cytochrome c biogenesis factor. | Cytochrome C biogenesis family protein; Possible subunit of a heme lyase. | 0.610 |
| CH54_44 | dsbE | CH54_44 | CH54_3852 | Tetratricopeptide repeat family protein; [O] COG4235 Cytochrome c biogenesis factor. | dsbE: periplasmic thiol:disulfide oxidoreductases, DsbE subfamily protein; [OC] COG0526 Thiol-disulfide isomerase and thioredoxins. | 0.689 |
| CH54_44 | dsbE-2 | CH54_44 | CH54_42 | Tetratricopeptide repeat family protein; [O] COG4235 Cytochrome c biogenesis factor. | dsbE: periplasmic thiol:disulfide oxidoreductases, DsbE subfamily protein; [OC] COG0526 Thiol-disulfide isomerase and thioredoxins. | 0.918 |
| ccmA-8 | CH54_44 | CH54_3846 | CH54_44 | Heme ABC exporter, ATP-binding protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Tetratricopeptide repeat family protein; [O] COG4235 Cytochrome c biogenesis factor. | 0.453 |
| ccmA-8 | ccmB | CH54_3846 | CH54_3847 | Heme ABC exporter, ATP-binding protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Heme exporter protein CcmB; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family. | 0.999 |
| ccmA-8 | ccmC | CH54_3846 | CH54_3848 | Heme ABC exporter, ATP-binding protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Heme exporter CcmC family protein; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family. | 0.997 |
| ccmA-8 | ccmE | CH54_3846 | CH54_3850 | Heme ABC exporter, ATP-binding protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | ccmE family protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family. | 0.940 |
| ccmA-8 | ccmF-2 | CH54_3846 | CH54_41 | Heme ABC exporter, ATP-binding protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | nrfE: cytochrome c-type biogenesis protein CcmF; [O] COG1138 Cytochrome c biogenesis factor. | 0.808 |
| ccmA-8 | ccmH_1 | CH54_3846 | CH54_43 | Heme ABC exporter, ATP-binding protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Cytochrome C biogenesis family protein; Possible subunit of a heme lyase. | 0.829 |
| ccmA-8 | ccmH_2 | CH54_3846 | CH54_3853 | Heme ABC exporter, ATP-binding protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Cytochrome C biogenesis family protein; Possible subunit of a heme lyase. | 0.903 |
| ccmA-8 | ccmI | CH54_3846 | CH54_3854 | Heme ABC exporter, ATP-binding protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | cytochro_ccmI: cytochrome c-type biogenesis protein CcmI; [O] COG4235 Cytochrome c biogenesis factor. | 0.892 |
| ccmA-8 | dsbE | CH54_3846 | CH54_3852 | Heme ABC exporter, ATP-binding protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | dsbE: periplasmic thiol:disulfide oxidoreductases, DsbE subfamily protein; [OC] COG0526 Thiol-disulfide isomerase and thioredoxins. | 0.886 |
| ccmA-8 | dsbE-2 | CH54_3846 | CH54_42 | Heme ABC exporter, ATP-binding protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | dsbE: periplasmic thiol:disulfide oxidoreductases, DsbE subfamily protein; [OC] COG0526 Thiol-disulfide isomerase and thioredoxins. | 0.790 |
| ccmB | ccmA-8 | CH54_3847 | CH54_3846 | Heme exporter protein CcmB; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family. | Heme ABC exporter, ATP-binding protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | 0.999 |
| ccmB | ccmC | CH54_3847 | CH54_3848 | Heme exporter protein CcmB; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family. | Heme exporter CcmC family protein; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family. | 0.999 |
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