Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CH54_568 | mutT | CH54_568 | CH54_1769 | Hypothetical protein. | Mutt: mutator mutT family protein; [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; Belongs to the Nudix hydrolase family. | 0.400 |
| CH54_568 | nudG | CH54_568 | CH54_567 | Hypothetical protein. | NUDIX domain protein; [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; Belongs to the Nudix hydrolase family. | 0.455 |
| CH54_568 | selD | CH54_568 | CH54_570 | Hypothetical protein. | Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP. | 0.686 |
| CH54_568 | topB | CH54_568 | CH54_569 | Hypothetical protein. | DNA topoisomerase III family protein; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus [...] | 0.797 |
| CH54_568 | ycgR | CH54_568 | CH54_3625 | Hypothetical protein. | pilZ domain protein; Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)-dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility. | 0.476 |
| CH54_568 | ydjA | CH54_568 | CH54_571 | Hypothetical protein. | Nitroreductase family protein; [C] COG0778 Nitroreductase. | 0.435 |
| mutT | CH54_568 | CH54_1769 | CH54_568 | Mutt: mutator mutT family protein; [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; Belongs to the Nudix hydrolase family. | Hypothetical protein. | 0.400 |
| nudG | CH54_568 | CH54_567 | CH54_568 | NUDIX domain protein; [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; Belongs to the Nudix hydrolase family. | Hypothetical protein. | 0.455 |
| selD | CH54_568 | CH54_570 | CH54_568 | Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP. | Hypothetical protein. | 0.686 |
| selD | topB | CH54_570 | CH54_569 | Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP. | DNA topoisomerase III family protein; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus [...] | 0.687 |
| selD | ydjA | CH54_570 | CH54_571 | Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP. | Nitroreductase family protein; [C] COG0778 Nitroreductase. | 0.561 |
| topB | CH54_568 | CH54_569 | CH54_568 | DNA topoisomerase III family protein; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus [...] | Hypothetical protein. | 0.797 |
| topB | selD | CH54_569 | CH54_570 | DNA topoisomerase III family protein; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus [...] | Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP. | 0.687 |
| topB | ydjA | CH54_569 | CH54_571 | DNA topoisomerase III family protein; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus [...] | Nitroreductase family protein; [C] COG0778 Nitroreductase. | 0.445 |
| ycgR | CH54_568 | CH54_3625 | CH54_568 | pilZ domain protein; Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)-dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility. | Hypothetical protein. | 0.476 |
| ydjA | CH54_568 | CH54_571 | CH54_568 | Nitroreductase family protein; [C] COG0778 Nitroreductase. | Hypothetical protein. | 0.435 |
| ydjA | selD | CH54_571 | CH54_570 | Nitroreductase family protein; [C] COG0778 Nitroreductase. | Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP. | 0.561 |
| ydjA | topB | CH54_571 | CH54_569 | Nitroreductase family protein; [C] COG0778 Nitroreductase. | DNA topoisomerase III family protein; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus [...] | 0.445 |