STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ansAasnASE_I: L-asparaginase, type I family protein; [EJ] COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D. (338 aa)    
Predicted Functional Partners:
aspA
aspA: aspartate ammonia-lyase; [E] COG1027 Aspartate ammonia-lyase.
 
 
 0.965
asnB
asn_synth_AEB: asparagine synthase; [E] COG0367 Asparagine synthase (glutamine-hydrolyzing).
  
  
 0.927
ansB
asnASE_II: L-asparaginase, type II family protein; [EJ] COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D; Belongs to the asparaginase 1 family.
  
  
0.924
nadB
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
   
 
 0.918
pyrI
Aspartate carbamoyltransferase, regulatory subunit; Involved in allosteric regulation of aspartate carbamoyltransferase.
  
  
  0.913
pyrB
Asp_carb_tr: aspartate carbamoyltransferase; [F] COG0540 Aspartate carbamoyltransferase, catalytic chain; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
  
  
  0.913
ygeA
Asp_race: aspartate racemase family protein; [M] COG1794 Aspartate racemase; Belongs to the aspartate/glutamate racemases family.
    
 0.912
argG
argG: argininosuccinate synthase; [E] COG0137 Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily.
   
 
 0.906
aspC
Aminotransferase class I and II family protein; [E] COG1448 Aspartate/tyrosine/aromatic aminotransferase.
     
 0.901
purA
Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
     
  0.900
Your Current Organism:
Yersinia kristensenii
NCBI taxonomy Id: 28152
Other names: ATCC 33638, CCUG 11294, CCUG 8241, CIP 80.30, DSM 18543, JCM 7576, NCTC 11471, Y. kristensenii, strain 105
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