STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
znuBABC 3 transport family protein; [P] COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components. (261 aa)    
Predicted Functional Partners:
znuC
ABC transporter family protein; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.
 
 0.999
znuA
Periplasmic solute binding family protein; [P] COG4531 ABC-type Zn2+ transport system, periplasmic component/surface adhesin.
 
 
 0.995
ecfA1
ABC transporter family protein; [P] COG1121 ABC-type Mn/Zn transport systems, ATPase component.
 
 
 0.886
fhuC_1
ABC transporter family protein; [P] COG1121 ABC-type Mn/Zn transport systems, ATPase component.
 
 
 0.872
CH54_241
Periplasmic solute binding family protein; [P] COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin; Belongs to the bacterial solute-binding protein 9 family.
  
 0.867
mtsA
Periplasmic solute binding family protein; [P] COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin; Belongs to the bacterial solute-binding protein 9 family.
  
 0.852
zinT
yodA lipocalin-like domain protein; [R] COG3443 Predicted periplasmic or secreted protein.
  
  
 0.707
lytM
lysM domain protein; [M] COG0739 Membrane proteins related to metalloendopeptidases.
  
    0.593
mntH
Metal ion transporter, metal ion family protein; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.
   
  
 0.576
mntB_2
ABC 3 transport family protein; [P] COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components.
  
  
 
0.528
Your Current Organism:
Yersinia kristensenii
NCBI taxonomy Id: 28152
Other names: ATCC 33638, CCUG 11294, CCUG 8241, CIP 80.30, DSM 18543, JCM 7576, NCTC 11471, Y. kristensenii, strain 105
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