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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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co-expression
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narR[T] COG3850 Signal transduction histidine kinase, nitrate/nitrite-specific. (593 aa)    
Predicted Functional Partners:
narL
Bacterial regulatory s, luxR family protein; [TK] COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
 
 0.928
nreC_1
Bacterial regulatory s, luxR family protein; [TK] COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
 
 0.788
uhpA_1
Bacterial regulatory s, luxR family protein; [TK] COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
 
 0.785
uhpA_3
Bacterial regulatory s, luxR family protein; [TK] COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
 
 0.773
rcsB_3
Bacterial regulatory s, luxR family protein; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsB is the response regulator that binds to regulatory DNA regions.
 
 
 0.660
bvgA
Bacterial regulatory s, luxR family protein; [TK] COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
 
 0.655
uvrY
Bacterial regulatory s, luxR family protein; [TK] COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
 
 0.601
hemN
hemN: oxygen-independent coproporphyrinogen III oxidase; [H] COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
    0.596
CH54_1968
SCP-2 sterol transfer family protein; [I] COG3154 Putative lipid carrier protein.
 
    0.570
arcB
Sensory box protein; [T] COG0642 Signal transduction histidine kinase.
  
  
 0.552
Your Current Organism:
Yersinia kristensenii
NCBI taxonomy Id: 28152
Other names: ATCC 33638, CCUG 11294, CCUG 8241, CIP 80.30, DSM 18543, JCM 7576, NCTC 11471, Y. kristensenii, strain 105
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