STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chaACaca2: calcium/proton exchanger family protein; [P] COG0387 Ca2+/H+ antiporter. (366 aa)    
Predicted Functional Partners:
yeeA
Fusaric acid resistance family protein; [S] COG1289 Predicted membrane protein.
  
     0.565
yccS_1
YCCS_YHJK: integral membrane, YccS/YhfK family protein; [S] COG1289 Predicted membrane protein.
  
     0.532
CH54_1338
Hypothetical protein.
  
     0.517
CH54_1488
Haloacid dehalogenase-like hydrolase family protein; [E] COG0560 Phosphoserine phosphatase.
  
     0.502
CH54_1570
Hypothetical protein.
  
     0.466
cpxP
LTXXQ motif family protein; [UNTP] COG3678 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein.
   
    0.454
CH54_2470
Hypothetical protein.
  
     0.453
viuB_2
[P] COG2375 Siderophore-interacting protein.
       0.440
CH54_400
Amidinotransferase family protein; [E] COG1834 N-Dimethylarginine dimethylaminohydrolase.
   
    0.438
yhjD
[S] COG1295 Predicted membrane protein.
  
    0.418
Your Current Organism:
Yersinia kristensenii
NCBI taxonomy Id: 28152
Other names: ATCC 33638, CCUG 11294, CCUG 8241, CIP 80.30, DSM 18543, JCM 7576, NCTC 11471, Y. kristensenii, strain 105
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