CH54_73 protein (Yersinia kristensenii) - STRING interaction network

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CH54_73

Conserved hypothetical protein; [R] COG1399 Predicted metal-binding, possibly nucleic acid-binding protein. (176 aa)

Predicted Functional Partners:

rpmF

0.978

rpsC

0.949

rimM

0.894

rpsP

0.881

rpsF

0.881

rpsB

0.880

infC

0.879

rplU

0.875

trmD

0.873

rpmI

0.873

Your Current Organism:

Yersinia kristensenii

NCBI taxonomy Id: 28152
Other names: ATCC 33638, CCUG 11294, CCUG 8241, CIP 80.30, DSM 18543, JCM 7576, NCTC 11471, Y. kristensenii, strain 105

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CH54_73	infC	CH54_73	CH54_253	Conserved hypothetical protein; [R] COG1399 Predicted metal-binding, possibly nucleic acid-binding protein.	infC: translation initiation factor IF-3; [J] COG0290 Translation initiation factor 3 (IF-3); Belongs to the IF-3 family.	0.879
CH54_73	rimM	CH54_73	CH54_1613	Conserved hypothetical protein; [R] COG1399 Predicted metal-binding, possibly nucleic acid-binding protein.	16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.	0.894
CH54_73	rplU	CH54_73	CH54_1996	Conserved hypothetical protein; [R] COG1399 Predicted metal-binding, possibly nucleic acid-binding protein.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.875
CH54_73	rpmF	CH54_73	CH54_74	Conserved hypothetical protein; [R] COG1399 Predicted metal-binding, possibly nucleic acid-binding protein.	rpmF_bact: ribosomal protein L32; [J] COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.978
CH54_73	rpmI	CH54_73	CH54_254	Conserved hypothetical protein; [R] COG1399 Predicted metal-binding, possibly nucleic acid-binding protein.	rpmI_bact: ribosomal protein L35; [J] COG0291 Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.	0.873
CH54_73	rpsB	CH54_73	CH54_3520	Conserved hypothetical protein; [R] COG1399 Predicted metal-binding, possibly nucleic acid-binding protein.	rpsB_bact: ribosomal protein S2; [J] COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.880
CH54_73	rpsC	CH54_73	CH54_2247	Conserved hypothetical protein; [R] COG1399 Predicted metal-binding, possibly nucleic acid-binding protein.	Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.949
CH54_73	rpsF	CH54_73	CH54_2025	Conserved hypothetical protein; [R] COG1399 Predicted metal-binding, possibly nucleic acid-binding protein.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.881
CH54_73	rpsP	CH54_73	CH54_1614	Conserved hypothetical protein; [R] COG1399 Predicted metal-binding, possibly nucleic acid-binding protein.	S16: ribosomal protein S16; [J] COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.881
CH54_73	trmD	CH54_73	CH54_1612	Conserved hypothetical protein; [R] COG1399 Predicted metal-binding, possibly nucleic acid-binding protein.	tRNA (guanine(37)-N(1))-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.	0.873
infC	CH54_73	CH54_253	CH54_73	infC: translation initiation factor IF-3; [J] COG0290 Translation initiation factor 3 (IF-3); Belongs to the IF-3 family.	Conserved hypothetical protein; [R] COG1399 Predicted metal-binding, possibly nucleic acid-binding protein.	0.879
infC	rimM	CH54_253	CH54_1613	infC: translation initiation factor IF-3; [J] COG0290 Translation initiation factor 3 (IF-3); Belongs to the IF-3 family.	16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.	0.573
infC	rplU	CH54_253	CH54_1996	infC: translation initiation factor IF-3; [J] COG0290 Translation initiation factor 3 (IF-3); Belongs to the IF-3 family.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.922
infC	rpmF	CH54_253	CH54_74	infC: translation initiation factor IF-3; [J] COG0290 Translation initiation factor 3 (IF-3); Belongs to the IF-3 family.	rpmF_bact: ribosomal protein L32; [J] COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.916
infC	rpmI	CH54_253	CH54_254	infC: translation initiation factor IF-3; [J] COG0290 Translation initiation factor 3 (IF-3); Belongs to the IF-3 family.	rpmI_bact: ribosomal protein L35; [J] COG0291 Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.	0.966
infC	rpsB	CH54_253	CH54_3520	infC: translation initiation factor IF-3; [J] COG0290 Translation initiation factor 3 (IF-3); Belongs to the IF-3 family.	rpsB_bact: ribosomal protein S2; [J] COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.978
infC	rpsC	CH54_253	CH54_2247	infC: translation initiation factor IF-3; [J] COG0290 Translation initiation factor 3 (IF-3); Belongs to the IF-3 family.	Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.972
infC	rpsF	CH54_253	CH54_2025	infC: translation initiation factor IF-3; [J] COG0290 Translation initiation factor 3 (IF-3); Belongs to the IF-3 family.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.970
infC	rpsP	CH54_253	CH54_1614	infC: translation initiation factor IF-3; [J] COG0290 Translation initiation factor 3 (IF-3); Belongs to the IF-3 family.	S16: ribosomal protein S16; [J] COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.964
infC	trmD	CH54_253	CH54_1612	infC: translation initiation factor IF-3; [J] COG0290 Translation initiation factor 3 (IF-3); Belongs to the IF-3 family.	tRNA (guanine(37)-N(1))-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.	0.627

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