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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fliZfliZ: flagellar regulatory protein FliZ. (174 aa)    
Predicted Functional Partners:
fliA_1
RNA polymerase sigma factor, FliA/WhiG family protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily.
  
  
 0.944
flgN
flgN family protein; [NUO] COG3418 Flagellar biosynthesis/type III secretory pathway chaperone.
   
  
 0.886
fliA_2
fliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family protein; [K] COG1191 DNA-directed RNA polymerase specialized sigma subunit; Belongs to the sigma-70 factor family.
  
  
 0.863
flgK
flgK_ends: flagellar hook-associated protein FlgK; [N] COG1256 Flagellar hook-associated protein.
   
   0.857
flgK-2
flgK_ends: flagellar hook-associated protein FlgK; [N] COG1256 Flagellar hook-associated protein.
   
   0.857
flgM
flgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM; [KNU] COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor).
   
  
 0.856
fliD_1
Flagellar hook-associated family protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
  
 0.848
flgC-2
flgC: flagellar basal-body rod protein FlgC; [N] COG1558 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
   
  
 0.822
flgB
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
   
  
 0.818
fliL
Flagellar basal body-associated FliL family protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
   
    0.818
Your Current Organism:
Yersinia kristensenii
NCBI taxonomy Id: 28152
Other names: ATCC 33638, CCUG 11294, CCUG 8241, CIP 80.30, DSM 18543, JCM 7576, NCTC 11471, Y. kristensenii, strain 105
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