STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cheYResponse regulator; [T] COG0784 FOG: CheY-like receiver. (129 aa)    
Predicted Functional Partners:
cheZ
Chemotaxis phosphatase, CheZ family protein; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).
 
 0.997
cheA
Signal transducing histidine kinase, homodimeric domain protein; [NT] COG0643 Chemotaxis protein histidine kinase and related kinases.
 
 0.987
bdlA
Sensory box protein; [T] COG2202 FOG: PAS/PAC domain.
 
 0.984
cheW
cheW-like domain protein; [NT] COG0835 Chemotaxis signal transduction protein.
 0.984
arcB
Sensory box protein; [T] COG0642 Signal transduction histidine kinase.
 
 
0.979
tap_1
Conserved hypothetical protein; [NT] COG0840 Methyl-accepting chemotaxis protein.
 
  0.978
cheD
Conserved hypothetical protein; [NT] COG0840 Methyl-accepting chemotaxis protein.
 
  0.969
aer
Sensory box protein; [NT] COG0840 Methyl-accepting chemotaxis protein.
  
  0.960
cheD2
[NT] COG0840 Methyl-accepting chemotaxis protein.
  
  0.959
trg_3
Conserved hypothetical protein; [NT] COG0840 Methyl-accepting chemotaxis protein.
  
  0.956
Your Current Organism:
Yersinia kristensenii
NCBI taxonomy Id: 28152
Other names: ATCC 33638, CCUG 11294, CCUG 8241, CIP 80.30, DSM 18543, JCM 7576, NCTC 11471, Y. kristensenii, strain 105
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