STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mglA_1ABC transporter family protein; [G] COG1129 ABC-type sugar transport system, ATPase component. (504 aa)    
Predicted Functional Partners:
rbsC_2
[G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 
 0.974
rbsA_1
ABC transporter family protein; [G] COG1129 ABC-type sugar transport system, ATPase component.
  
  
 
0.916
rbsC_8
[G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
   0.882
rbsC1
[G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
   0.875
rbsC_3
[G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
   0.870
lsrD_2
[G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
   0.869
lsrC
[G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
   0.862
lsrD_1
[G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
   0.852
mglB_1
Periplasmic binding domain protein; [G] COG1879 ABC-type sugar transport system, periplasmic component.
 
   0.821
mglC
[G] COG4211 ABC-type glucose/galactose transport system, permease component.
  
 0.813
Your Current Organism:
Yersinia kristensenii
NCBI taxonomy Id: 28152
Other names: ATCC 33638, CCUG 11294, CCUG 8241, CIP 80.30, DSM 18543, JCM 7576, NCTC 11471, Y. kristensenii, strain 105
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.