A0A2H2HVP7 protein (Caenorhabditis japonica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A2H2HVP7

Uncharacterized protein. (489 aa)

Predicted Functional Partners:

A0A2H2HUM8

0.708

A0A2H2I754

0.627

A0A2H2IT59

0.604

K7GVM8_CAEJA

0.604

K7H741_CAEJA

0.604

A0A2H2IE73

0.603

A0A2H2I2J2

0.585

A0A2H2ICJ8

0.585

A0A2H2I5S3

0.584

A0A2H2IBJ0

0.583

Your Current Organism:

Caenorhabditis japonica

NCBI taxonomy Id: 281687
Other names: C. japonica

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2H2HUM8	A0A2H2HVP7	A0A2H2HUM8	A0A2H2HVP7	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	Uncharacterized protein.	0.708
A0A2H2HUM8	A0A2H2ICJ8	A0A2H2HUM8	A0A2H2ICJ8	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.999
A0A2H2HUM8	A0A2H2IT59	A0A2H2HUM8	A0A2H2IT59	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	Guanylate kinase-like domain-containing protein.	0.536
A0A2H2HUM8	K7GVM8_CAEJA	A0A2H2HUM8	K7GVM8	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	PDZ domain-containing protein.	0.536
A0A2H2HUM8	K7H741_CAEJA	A0A2H2HUM8	K7H741	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	Uncharacterized protein; Belongs to the MAGUK family.	0.536
A0A2H2HVP7	A0A2H2HUM8	A0A2H2HVP7	A0A2H2HUM8	Uncharacterized protein.	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	0.708
A0A2H2HVP7	A0A2H2I2J2	A0A2H2HVP7	A0A2H2I2J2	Uncharacterized protein.	Uncharacterized protein.	0.585
A0A2H2HVP7	A0A2H2I5S3	A0A2H2HVP7	A0A2H2I5S3	Uncharacterized protein.	Uncharacterized protein.	0.584
A0A2H2HVP7	A0A2H2I754	A0A2H2HVP7	A0A2H2I754	Uncharacterized protein.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.627
A0A2H2HVP7	A0A2H2IBJ0	A0A2H2HVP7	A0A2H2IBJ0	Uncharacterized protein.	IFT81_CH domain-containing protein.	0.583
A0A2H2HVP7	A0A2H2ICJ8	A0A2H2HVP7	A0A2H2ICJ8	Uncharacterized protein.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.585
A0A2H2HVP7	A0A2H2IE73	A0A2H2HVP7	A0A2H2IE73	Uncharacterized protein.	Uncharacterized protein.	0.603
A0A2H2HVP7	A0A2H2IT59	A0A2H2HVP7	A0A2H2IT59	Uncharacterized protein.	Guanylate kinase-like domain-containing protein.	0.604
A0A2H2HVP7	K7GVM8_CAEJA	A0A2H2HVP7	K7GVM8	Uncharacterized protein.	PDZ domain-containing protein.	0.604
A0A2H2HVP7	K7H741_CAEJA	A0A2H2HVP7	K7H741	Uncharacterized protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.604
A0A2H2I2J2	A0A2H2HVP7	A0A2H2I2J2	A0A2H2HVP7	Uncharacterized protein.	Uncharacterized protein.	0.585
A0A2H2I5S3	A0A2H2HVP7	A0A2H2I5S3	A0A2H2HVP7	Uncharacterized protein.	Uncharacterized protein.	0.584
A0A2H2I5S3	A0A2H2IBJ0	A0A2H2I5S3	A0A2H2IBJ0	Uncharacterized protein.	IFT81_CH domain-containing protein.	0.999
A0A2H2I5S3	A0A2H2IT59	A0A2H2I5S3	A0A2H2IT59	Uncharacterized protein.	Guanylate kinase-like domain-containing protein.	0.715
A0A2H2I5S3	K7GVM8_CAEJA	A0A2H2I5S3	K7GVM8	Uncharacterized protein.	PDZ domain-containing protein.	0.715