Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
A0A2H2HZ95NUC173 domain-containing protein. (1315 aa)    
Predicted Functional Partners:
A0A2H2IJ15
Bms1-type G domain-containing protein.
   
 
 0.997
nath-10
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 
 0.997
A0A2H2HVB4
Bms1-type G domain-containing protein.
   
 
 0.995
A0A2H2HZU9
Uncharacterized protein.
   
 
 0.994
A0A2H2IDQ1
CBF domain-containing protein.
   
 
 0.994
A0A2H2I4Z7
RIO domain-containing protein.
   
 
 0.989
A0A2H2IFE9
Nop domain-containing protein.
   
 
 0.989
lpd-7
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 
 0.989
K7H9W1_CAEJA
Uncharacterized protein.
   
 
 0.989
K7I2Y7_CAEJA
Uncharacterized protein.
   
 
 0.989
Your Current Organism:
Caenorhabditis japonica
NCBI taxonomy Id: 281687
Other names: C. japonica
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