STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2H2IDB1Uncharacterized protein. (405 aa)    
Predicted Functional Partners:
A0A2H2ICX5
PCI domain-containing protein.
    
 0.711
A0A2H2JD25
Ribosomal_S27 domain-containing protein.
    
 0.706
H2WZ45_CAEJA
Ubiquitin-like domain-containing protein.
    
 0.706
A0A2H2I513
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.683
A0A2Q4SHJ1
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.683
K7H6M1_CAEJA
Uncharacterized protein.
   
 0.647
A0A2H2I873
B30.2/SPRY domain-containing protein.
    
 0.645
A0A2H2IH01
WD_REPEATS_REGION domain-containing protein.
    
 0.635
A0A2H2ICD7
Histone H3; Belongs to the histone H3 family.
   
 0.624
A0A2H2ISD1
Histone domain-containing protein.
   
 0.624
Your Current Organism:
Caenorhabditis japonica
NCBI taxonomy Id: 281687
Other names: C. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.