STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2H2IGJ4NR LBD domain-containing protein. (179 aa)    
Predicted Functional Partners:
A0A2H2IB66
Homeobox domain-containing protein.
    
 
 0.705
A0A2H2I8S9
Uncharacterized protein.
    
 0.680
A0A2H2I9K7
Uncharacterized protein.
    
 
 0.672
A0A2H2ID51
Prospero domain-containing protein.
    
 
 0.653
K7HCJ4_CAEJA
BHLH domain-containing protein.
    
 
 0.615
A0A2H2IDF5
CS domain-containing protein.
   
  0.592
A0A2H2IB33
Uncharacterized protein.
    
 0.567
A0A2H2I1D2
Uncharacterized protein.
    
 0.561
A0A2H2IRG7
Myb-like domain-containing protein.
    
 0.561
K7GVK2_CAEJA
Uncharacterized protein.
    
 0.561
Your Current Organism:
Caenorhabditis japonica
NCBI taxonomy Id: 281687
Other names: C. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.