STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2H2IUN0Reverse transcriptase domain-containing protein. (188 aa)    
Predicted Functional Partners:
A0A2H2IKI0
CRC domain-containing protein.
    
 0.579
K7H1B8_CAEJA
Uncharacterized protein.
    
 0.550
A0A2H2I9Y2
dUTPase domain-containing protein.
    
  0.545
A0A2H2IQK8
Uncharacterized protein.
    
 0.513
A0A2H2I078
Uncharacterized protein.
    
 0.505
A0A2H2I2D2
Uncharacterized protein.
    
 0.505
K7IIQ0_CAEJA
Reverse transcriptase domain-containing protein.
  
     0.499
K7GZK6_CAEJA
Uncharacterized protein.
    
  0.498
A0A2H2IY13
RT_RNaseH_2 domain-containing protein.
  
     0.488
A0A2H2J023
Reverse transcriptase domain-containing protein.
  
     0.487
Your Current Organism:
Caenorhabditis japonica
NCBI taxonomy Id: 281687
Other names: C. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.