STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2H2IXM8Uncharacterized protein. (86 aa)    
Predicted Functional Partners:
A0A2H2HV38
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
 0.787
A0A2H2IXM3
Uncharacterized protein.
   
 0.787
K7H287_CAEJA
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
 0.787
A0A2H2IMR4
Neur_chan_LBD domain-containing protein.
   
 
  0.665
A0A2H2IYA8
Uncharacterized protein.
   
 
  0.665
A0A2H2JIC4
Uncharacterized protein.
   
 
  0.665
lgg
Protein lgg.
     
 0.616
A0A2H2J5Y5
Uncharacterized protein.
    
 0.566
K7GXC0_CAEJA
HAP1 N-terminal domain-containing protein.
    
 0.566
K7HPJ5_CAEJA
HAP1 N-terminal domain-containing protein.
    
 0.566
Your Current Organism:
Caenorhabditis japonica
NCBI taxonomy Id: 281687
Other names: C. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.