STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2H2J364Rhomboid domain-containing protein. (148 aa)    
Predicted Functional Partners:
A0A2H2HWF4
Prohibitin.
   
 0.758
A0A2H2JF47
Uncharacterized protein.
   
 0.748
K7GY53_CAEJA
PHB domain-containing protein.
   
 0.748
A0A2H2HW96
AAA domain-containing protein.
  
 
 0.721
A0A2H2J2B0
AAA_lid_3 domain-containing protein.
  
 
 0.721
A0A2H2HZL6
Peptidase_M41 domain-containing protein.
  
 
 0.679
A0A2H2INC5
Uncharacterized protein; Belongs to the AAA ATPase family.
  
 
 0.679
A0A2H2IXK7
ATPase_AAA_core domain-containing protein.
  
 
 0.679
A0A2H2J933
Uncharacterized protein.
  
 
 0.679
K7I927_CAEJA
Peptidase_M41 domain-containing protein.
  
 
 0.679
Your Current Organism:
Caenorhabditis japonica
NCBI taxonomy Id: 281687
Other names: C. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.