STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2H2J3H7Autophagy_act_C domain-containing protein. (154 aa)    
Predicted Functional Partners:
A0A2H2HUB6
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.
   
 0.999
A0A2H2HX74
Autophagy protein 5; Involved in autophagic vesicle formation.
    
 0.999
A0A2H2J473
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation.
    
 0.999
lgg
Protein lgg.
   
 0.749
A0A2H2IEI9
Uncharacterized protein.
      
 0.747
A0A2H2IVZ3
Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily.
      
 0.744
K7IFY5_CAEJA
Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily.
      
 0.744
A0A2H2IKW7
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
      
 0.740
A0A2H2JC43
PIK helical domain-containing protein.
      
 0.740
A0A2H2JDW0
Uncharacterized protein.
      
 0.740
Your Current Organism:
Caenorhabditis japonica
NCBI taxonomy Id: 281687
Other names: C. japonica
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