STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2H2JGK4Paired domain-containing protein. (135 aa)    
Predicted Functional Partners:
K7IKH1_CAEJA
Uncharacterized protein.
    
 0.911
A0A2H2I7R6
zf-Tim10_DDP domain-containing protein.
   
 0.800
A0A2H2HUD6
HMG box domain-containing protein.
   
 
 0.796
A0A2H2IN48
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q); Belongs to the CybS family.
    
 0.790
A0A2H2IC24
Homeobox domain-containing protein.
    
 
 0.751
K7I568_CAEJA
Homeobox domain-containing protein.
  
 
 
 0.738
A0A2H2I8S9
Uncharacterized protein.
     
 0.669
K7H7G0_CAEJA
Homeobox domain-containing protein.
    
 
 0.652
A0A2H2I2Q6
Homeobox domain-containing protein.
    
 0.645
A0A2H2J0Q9
Homeobox domain-containing protein.
  
 
 
 0.616
Your Current Organism:
Caenorhabditis japonica
NCBI taxonomy Id: 281687
Other names: C. japonica
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