STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vvpDType 4 prepilin-like proteins leader peptide-processing enzyme [Includes: Leader peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. (289 aa)    
Predicted Functional Partners:
pilC
Type IV pilin assembly protein pilC; Function experimentally demonstrated in the studied genus; structure.
 
  
 0.961
tapB
Type IV pilus assembly protein tapB; Function of homologous gene experimentally demonstrated in an other organism; structure.
 
 
 0.956
epsE
General secretion pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 
 0.881
mshG
MSHA biogenesis protein MshG; Function experimentally demonstrated in the studied genus; enzyme.
 
  
 0.879
mshE
Mannose-sensitive hemagglutinin E; Function experimentally demonstrated in the studied genus; structure.
 
 
 0.879
epsF
General secretion pathway protein F; Function experimentally demonstrated in the studied genus; transporter.
 
  
 0.878
CCO56383.1
Putative Pili subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
 
   
 0.841
pilU
Fragment of Tfp pilus assembly protein (part 2); Function of homologous gene experimentally demonstrated in an other organism; structure.
  
   
 0.831
CCO59558.1
Putative Type IV pilus assembly protein PilM; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
 
  
 0.825
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
  
  
 0.818
Your Current Organism:
Vibrio nigripulchritudo
NCBI taxonomy Id: 28173
Other names: ATCC 27043, Beneckea nigrapulchrituda, Beneckea nigripulchritudo, CAIM 323, CCUG 28586, CIP 103195, LMG 3896, LMG:3896, V. nigripulchritudo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.