STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCO57864.1Putative Glycosyl hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (361 aa)    
Predicted Functional Partners:
kduI-2
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
 
   
 0.792
kduI
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
 
   
 0.790
CCO60220.1
Putative Glycosyl Hydrolase fused with F5/8 type C domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.717
CCO60474.1
Putative Six-hairpin glycosidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.695
CCO57863.1
Putative transcriptional regulator, GntR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
       0.686
CCO60501.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.678
uxaC
Uronate isomerase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
   
 0.583
kduD-2
2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
   
 0.499
kduD
2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
   
 0.478
Your Current Organism:
Vibrio nigripulchritudo
NCBI taxonomy Id: 28173
Other names: ATCC 27043, Beneckea nigrapulchrituda, Beneckea nigripulchritudo, CAIM 323, CCUG 28586, CIP 103195, LMG 3896, LMG:3896, V. nigripulchritudo
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