STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cutC-3Putative Cytoplasmic copper homeostasis protein cutC; Participates in the control of copper homeostasis. Belongs to the CutC family. (214 aa)    
Predicted Functional Partners:
cutC-2
Putative Cytoplasmic copper homeostasis protein cutC; Participates in the control of copper homeostasis. Belongs to the CutC family.
 
    
0.710
exo
Beta-hexosaminidase; Function experimentally demonstrated in the studied genus; enzyme.
 
     0.529
CCO57967.1
Putative sugar phosphate isomerase involved in capsule formation; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.483
metK
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
  
    0.468
copA
Copper-exporting P-type ATPase A; Function of homologous gene experimentally demonstrated in an other organism; transporter.
     
 0.438
CCO57133.1
Putative sugar isomerase, AgaS; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.418
Your Current Organism:
Vibrio nigripulchritudo
NCBI taxonomy Id: 28173
Other names: ATCC 27043, Beneckea nigrapulchrituda, Beneckea nigripulchritudo, CAIM 323, CCUG 28586, CIP 103195, LMG 3896, LMG:3896, V. nigripulchritudo
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.