STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Experiments
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[Homology]
Score
CCO57981.1Putative Autoinducer 2-binding periplasmic protein LuxP precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (369 aa)    
Predicted Functional Partners:
luxQ
Autoinducer 2 sensor kinase/phosphatase luxQ; Function of homologous gene experimentally demonstrated in an other organism; regulator.
   
 0.971
luxP
Autoinducer 2-binding periplasmic protein luxP; Function of homologous gene experimentally demonstrated in an other organism; receptor.
  
  
 
0.923
luxS
S-ribosylhomocysteine lyase; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family.
     
 0.919
luxU
Phosphorelay protein luxU; Function of homologous gene experimentally demonstrated in an other organism; regulator.
     
 0.919
CCO57980.1
Putative ABC-type sugar transport system, periplasmic component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
     0.832
CCO59088.1
Putative Lamin A/C globular tail domain protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.716
CCO58133.1
Putative Signal receiver domain REC fused with EAL domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
 
 0.651
cqsS
CAI-1 autoinducer sensor kinase/phosphatase cqsS; Function experimentally demonstrated in the studied genus; putative receptor.
   
 
 0.629
CCO57597.1
Putative Sensor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
   
 
 0.622
arcB
Aerobic respiration control sensor protein arcB; Function of homologous gene experimentally demonstrated in an other organism; regulator.
   
 
 0.610
Your Current Organism:
Vibrio nigripulchritudo
NCBI taxonomy Id: 28173
Other names: ATCC 27043, Beneckea nigrapulchrituda, Beneckea nigripulchritudo, CAIM 323, CCUG 28586, CIP 103195, LMG 3896, LMG:3896, V. nigripulchritudo
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