STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCO58018.1Putative Flp pilus assembly protein, secretin CpaC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the bacterial secretin family. (436 aa)    
Predicted Functional Partners:
CCO58013.1
Putative Flp pilus assembly protein TadC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
 
  
 0.970
CCO58015.1
Putative Flp pilus assembly protein, ATPase CpaF; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
  
 0.965
CCO58014.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.959
CCO59419.1
Putative Flp pilus assembly protein CpaB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; phenotype.
 
  
 0.882
CCO58016.1
Putative ATPase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.878
CCO60484.1
Putative Flp pilus assembly protein, ATPase CpaF; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
  
 0.855
CCO59415.1
Putative Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
 0.852
CCO59416.1
Putative Flp pilus assembly protein, ATPase CpaE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.846
CCO60486.1
Putative Flp pilus assembly protein TadC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
 
  
 0.832
CCO60485.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.830
Your Current Organism:
Vibrio nigripulchritudo
NCBI taxonomy Id: 28173
Other names: ATCC 27043, Beneckea nigrapulchrituda, Beneckea nigripulchritudo, CAIM 323, CCUG 28586, CIP 103195, LMG 3896, LMG:3896, V. nigripulchritudo
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