STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCO58925.1Putative Two component Sensor/histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (624 aa)    
Predicted Functional Partners:
CCO58133.1
Putative Signal receiver domain REC fused with EAL domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
 0.983
CCO57714.1
Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.887
CCO58806.1
Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
 0.880
CCO59727.1
Putative GGDEF family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.879
CCO57716.1
Putative diguanylate phosphodiesterase (EAL domain) with PAS/PAC sensor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 0.872
CCO57202.1
Putative Diguanylate phosphodiesterase/Diguanylate cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.869
CCO58522.1
Putative CheY-like receiver fused with EAL domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
 0.865
CCO58305.1
Putative PAS/EAL family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.853
CCO60307.1
Putative TWO-COMPONENT SENSOR PROTEIN HISTIDINE PROTEIN KINASE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
 
 0.842
CCO60947.1
Putative EAL, GGDEF and GAF domains protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.839
Your Current Organism:
Vibrio nigripulchritudo
NCBI taxonomy Id: 28173
Other names: ATCC 27043, Beneckea nigrapulchrituda, Beneckea nigripulchritudo, CAIM 323, CCUG 28586, CIP 103195, LMG 3896, LMG:3896, V. nigripulchritudo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.