STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCO59293.1Putative solute:sodium symporter, small subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (87 aa)    
Predicted Functional Partners:
CCO59294.1
Putative Sodium/solute symporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
    0.958
CCO58100.1
Putative signal-transduction protein containing cAMP-binding and CBS domains; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
     0.731
CCO59300.1
Putative signal-transduction protein containing cAMP-binding and CBS domains; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
     0.613
CCO59295.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.584
CCO59292.1
Putative Signal transduction response regulator fused with Transcriptional regulator, LuxR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
       0.515
CCO58101.1
Putative DNA polymerase III subunit epsilon; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.489
Your Current Organism:
Vibrio nigripulchritudo
NCBI taxonomy Id: 28173
Other names: ATCC 27043, Beneckea nigrapulchrituda, Beneckea nigripulchritudo, CAIM 323, CCUG 28586, CIP 103195, LMG 3896, LMG:3896, V. nigripulchritudo
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