STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
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[Homology]
Score
CCO59429.1Putative Type I restriction-modification system methyltransferase subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (545 aa)    
Predicted Functional Partners:
CCO59428.1
Putative Restriction endonuclease S subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.993
CCO59425.1
Type I restriction enzyme R Protein; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
 
 0.990
CCO58109.1
Putative Restriction endonuclease S subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.972
CCO58106.1
Type I restriction enzyme R Protein; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
 
 0.960
CCO59427.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
  
 0.860
CCO59426.1
Putative Restriction endonuclease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
     
 0.795
CCO59424.1
Hypothetical protein; No homology to any previously reported sequences.
       0.773
CCO60950.1
Putative ATP-dependent endonuclease of the OLD family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.628
CCO57974.1
Putative DNA or RNA helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.621
CCO59430.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.553
Your Current Organism:
Vibrio nigripulchritudo
NCBI taxonomy Id: 28173
Other names: ATCC 27043, Beneckea nigrapulchrituda, Beneckea nigripulchritudo, CAIM 323, CCUG 28586, CIP 103195, LMG 3896, LMG:3896, V. nigripulchritudo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.