STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCO59431.1Putative ATPase component of ABC transporter with duplicated ATPase domains; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (475 aa)    
Predicted Functional Partners:
CCO59433.1
Putative TnsA endonuclease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 
 0.980
CCO59432.1
Putative integrase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.977
CCO59430.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
   
 0.928
CCO58114.1
Putative TnsA endonuclease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 
 0.917
CCO58113.1
Putative integrase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.904
CCO58111.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
   
 0.791
CCO57312.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.657
CCO61297.1
Putative Acyltransferase family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.651
CCO56761.1
Putative AsmA protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
  
     0.611
CCO57537.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
 
 0.584
Your Current Organism:
Vibrio nigripulchritudo
NCBI taxonomy Id: 28173
Other names: ATCC 27043, Beneckea nigrapulchrituda, Beneckea nigripulchritudo, CAIM 323, CCUG 28586, CIP 103195, LMG 3896, LMG:3896, V. nigripulchritudo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.