STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCO60205.1Putative ARAC FAMILY TRANSCRIPTIONAL REGULATORY PROTEIN; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (302 aa)    
Predicted Functional Partners:
CCO60204.1
Putative Isochorismatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
    0.714
CCO60469.1
Putative Transcriptional regulator, AraC family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
 
 0.708
CCO60207.1
Putative Acetyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
    0.698
CCO60206.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.697
CCO60848.1
Putative AraC-type DNA-binding domain-containing protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 
 0.656
CCO60686.1
Putative Transcriptional regulator, araC family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
 
 0.650
CCO57800.1
Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
     0.629
CCO60098.1
Putative Transcriptional regulator, AraC family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
 
 0.612
CCO61647.1
Putative transcriptional regulator, AraC family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
 
 0.590
CCO59862.1
Putative ARAC FAMILY TRANSCRIPTIONAL REGULATORY PROTEIN; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
 
 0.570
Your Current Organism:
Vibrio nigripulchritudo
NCBI taxonomy Id: 28173
Other names: ATCC 27043, Beneckea nigrapulchrituda, Beneckea nigripulchritudo, CAIM 323, CCUG 28586, CIP 103195, LMG 3896, LMG:3896, V. nigripulchritudo
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