STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCO60454.1Putative Galactose mutarotase-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (291 aa)    
Predicted Functional Partners:
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
  
 0.968
lacZ
Beta-galactosidase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.917
CCO60337.1
Putative Transcriptional regulator/sugar kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
    
 0.905
CCO61025.1
Putative haloacid dehalogenase superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
 
  0.903
melA
Alpha-galactosidase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
  0.900
galM
Galactose-1-epimerase (Galactose mutarotase); Converts alpha-aldose to the beta-anomer.
     
  0.900
CCO60456.1
Putative ABC-type sugar transport system, ATPase component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
       0.778
CCO60457.1
Putative ABC-type branched-chain amino acid transport system, permease component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the binding-protein-dependent transport system permease family.
       0.776
CCO60455.1
Putative 3-oxoacyl-[acyl-carrier-protein] reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.775
CCO60458.1
Putative ABC-type sugar transport system, periplasmic component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
       0.685
Your Current Organism:
Vibrio nigripulchritudo
NCBI taxonomy Id: 28173
Other names: ATCC 27043, Beneckea nigrapulchrituda, Beneckea nigripulchritudo, CAIM 323, CCUG 28586, CIP 103195, LMG 3896, LMG:3896, V. nigripulchritudo
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