STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCO61009.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0312 family. (194 aa)    
Predicted Functional Partners:
CCO60955.1
Putative cytochrome b561; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
 
  
 0.598
CCO61010.1
Putative Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.545
CCO61011.1
Putative Type 1 glutamine amidotransferase (GATase1)-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
    0.489
CCO59144.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.469
CCO61371.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.448
CCO61012.1
Putative DNA helicase IV; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.446
ibpA
Small heat shock protein ibpA; Function of homologous gene experimentally demonstrated in an other organism; factor; Belongs to the small heat shock protein (HSP20) family.
  
     0.427
CCO59143.1
Putative ABC-type antimicrobial peptide transport system, permease component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
     0.403
Your Current Organism:
Vibrio nigripulchritudo
NCBI taxonomy Id: 28173
Other names: ATCC 27043, Beneckea nigrapulchrituda, Beneckea nigripulchritudo, CAIM 323, CCUG 28586, CIP 103195, LMG 3896, LMG:3896, V. nigripulchritudo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.