STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
puuEAllantoinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (308 aa)    
Predicted Functional Partners:
CCO61189.1
Putative 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
    0.995
pucM
5-hydroxyisourate hydrolase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
    0.934
alc
Putative allantoicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the allantoicase family.
 
 
 0.903
CCO61186.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
    0.891
allA
Ureidoglycolate hydrolase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source.
 
     0.855
guaD
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
   
 0.787
xdhB
Xanthine dehydrogenase subunit B; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
     0.728
xdhA
Xanthine dehydrogenase subunit A; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
     0.723
CCO61234.1
Putative Xanthine dehydrogenase accessory protein XdhC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
 
     0.685
CCO61192.1
Putative Transcriptional regulator, TetR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
   
 0.559
Your Current Organism:
Vibrio nigripulchritudo
NCBI taxonomy Id: 28173
Other names: ATCC 27043, Beneckea nigrapulchrituda, Beneckea nigripulchritudo, CAIM 323, CCUG 28586, CIP 103195, LMG 3896, LMG:3896, V. nigripulchritudo
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