Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CCO61552.1 | CCO61553.1 | VIBNI_B1829 | VIBNI_B1831 | Putative Protein kinase-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Conserved hypothetical protein carrying PilZ domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.407 |
CCO61552.1 | pgl | VIBNI_B1829 | VIBNI_B1827 | Putative Protein kinase-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. | 0.433 |
CCO61552.1 | pta | VIBNI_B1829 | VIBNI_A2402 | Putative Protein kinase-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.412 |
CCO61552.1 | zwf | VIBNI_B1829 | VIBNI_B1828 | Putative Protein kinase-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.404 |
CCO61553.1 | CCO61552.1 | VIBNI_B1831 | VIBNI_B1829 | Conserved hypothetical protein carrying PilZ domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Putative Protein kinase-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.407 |
pgl | CCO61552.1 | VIBNI_B1827 | VIBNI_B1829 | 6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. | Putative Protein kinase-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.433 |
pgl | zwf | VIBNI_B1827 | VIBNI_B1828 | 6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.999 |
pta | CCO61552.1 | VIBNI_A2402 | VIBNI_B1829 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Putative Protein kinase-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.412 |
pta | zwf | VIBNI_A2402 | VIBNI_B1828 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.678 |
zwf | CCO61552.1 | VIBNI_B1828 | VIBNI_B1829 | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | Putative Protein kinase-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.404 |
zwf | pgl | VIBNI_B1828 | VIBNI_B1827 | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. | 0.999 |
zwf | pta | VIBNI_B1828 | VIBNI_A2402 | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.678 |