STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hpaC4-hydroxyphenylacetate 3-monooxygenase reductase component; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (169 aa)    
Predicted Functional Partners:
C2-hpah
P-hydroxyphenylacetate hydroxylase C2:oxygenase component; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
    
 0.963
fre
NAD(P)H-flavin reductase; Function experimentally demonstrated in the studied genus; enzyme.
  
 
  0.918
frp
NADPH-flavin oxidoreductase; Function experimentally demonstrated in the studied genus; enzyme; Belongs to the flavin oxidoreductase frp family.
  
 
 0.914
bluB
Putative cob(II)yrinic acid a,c-diamide reductase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.914
hpcB
3,4-dihydroxyphenylacetate 2,3-dioxygenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.911
ribF
Riboflavin biosynthesis protein ribF [Includes: Riboflavin kinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the ribF family.
    
 0.907
ribE
Riboflavin synthase subunit alpha; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
    
  0.903
ribE-3
Riboflavin synthase alpha chain; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
    
  0.903
CCO59728.1
Putative Haloacid dehalogenase-like hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
     
 0.902
hpcG
2-oxo-hepta-3-ene-1,7-dioic acid hydratase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
   
 0.646
Your Current Organism:
Vibrio nigripulchritudo
NCBI taxonomy Id: 28173
Other names: ATCC 27043, Beneckea nigrapulchrituda, Beneckea nigripulchritudo, CAIM 323, CCUG 28586, CIP 103195, LMG 3896, LMG:3896, V. nigripulchritudo
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