STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCO61695.1Putative Universal stress protein A; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process. (163 aa)    
Predicted Functional Partners:
CCO61696.1
Putative Bordetella uptake gene (bug) product; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.762
CCO61697.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.629
CCO61698.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.629
CCO61693.1
Putative transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
   
 0.544
CCO61694.1
Putative aldehyde dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the aldehyde dehydrogenase family.
     
 0.533
ogt
Methylated-DNA--protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.
  
    0.450
CCO58641.1
Putative Kef-type K+ transport system; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
  
 0.432
CCO58984.1
Putative Ribosomal protein S30Ae/sigma 54 modulation protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
   
  
 0.418
raiA
Ribosome-associated inhibitor A; Function of homologous gene experimentally demonstrated in an other organism; factor.
   
  
 0.404
Your Current Organism:
Vibrio nigripulchritudo
NCBI taxonomy Id: 28173
Other names: ATCC 27043, Beneckea nigrapulchrituda, Beneckea nigripulchritudo, CAIM 323, CCUG 28586, CIP 103195, LMG 3896, LMG:3896, V. nigripulchritudo
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