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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF66_0153Putative glycosyltransferase. (364 aa)    
Predicted Functional Partners:
CF66_0151
Chain length determinant protein.
 
 
  0.954
exoT
Succinoglycan biosynthesis transport protein.
 
 
  0.913
CF66_0149
Glycotransferase.
 
  
  0.909
exoQ
Exopolysaccharide production protein.
 
 
  0.900
CF66_0150
Glycosyltransferase.
 
     0.856
ispD
Glycosyltransferase.
 
     0.831
CF66_0163
Polysaccharide export protein.
 
 
  0.797
spoIIAA
Anti-sigma F factor regulatory protein.
 
     0.778
CF66_0162
Chromosome partitioning ATPase.
 
    0.753
CF66_2387
Hypothetical protein.
  
  
  0.705
Your Current Organism:
Photodesmus katoptron
NCBI taxonomy Id: 28176
Other names: Anomalops katoptron symbiont, C. Photodesmus katoptron, Candidatus Photodesmus katoptron
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