Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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[Homology]
Score
fliSFlagellar protein. (136 aa)    
Predicted Functional Partners:
fliD
Flagellar hook-associated protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
 
 
 0.998
flgL
Flagellar hook-associated protein 3.
 
 
 0.998
flgK
Flagellar hook-associated protein 1; Belongs to the flagella basal body rod proteins family.
 
 
 0.995
fliE
Flagellar hook-basal body complex protein.
 
 
 0.992
flaA
Flagellin A; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
 
 0.990
flaD
Flagellin D; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
 
 0.990
fliM
Flagellar motor switch protein; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
  
 0.982
fliH
Flagellar assembly protein.
 
  
 0.982
fliI
Flagellum-specific ATP synthase.
  
 
 0.978
fliF
Flagellar M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.976
Your Current Organism:
Photodesmus katoptron
NCBI taxonomy Id: 28176
Other names: Anomalops katoptron symbiont, C. Photodesmus katoptron, Candidatus Photodesmus katoptron
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