truB protein (Photodesmus katoptron) - STRING interaction network

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Score

truB

tRNA pseudouridine synthase B; Belongs to the pseudouridine synthase TruB family. (313 aa)

Predicted Functional Partners:

infB

0.991

rbfA

0.987

guaA

0.963

nusA

0.935

rpsA

0.849

rimP

0.847

ribF

0.846

tmcA

0.831

rbgA

0.801

rps

0.793

Your Current Organism:

Photodesmus katoptron

NCBI taxonomy Id: 28176
Other names: Anomalops katoptron symbiont, C. Photodesmus katoptron, Candidatus Photodesmus katoptron

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
guaA	infB	CF66_9008	CF66_2112	GMP synthase; Catalyzes the synthesis of GMP from XMP.	Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.	0.775
guaA	nusA	CF66_9008	CF66_2113	GMP synthase; Catalyzes the synthesis of GMP from XMP.	Transcription elongation protein; Participates in both transcription termination and antitermination.	0.515
guaA	rbgA	CF66_9008	CF66_2364	GMP synthase; Catalyzes the synthesis of GMP from XMP.	Ribosome biogenesis GTPase A; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.	0.712
guaA	rimP	CF66_9008	CF66_2114	GMP synthase; Catalyzes the synthesis of GMP from XMP.	Ribosome maturation factor; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.	0.457
guaA	rps	CF66_9008	CF66_2251	GMP synthase; Catalyzes the synthesis of GMP from XMP.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.750
guaA	rpsA	CF66_9008	CF66_2351	GMP synthase; Catalyzes the synthesis of GMP from XMP.	30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.	0.753
guaA	tmcA	CF66_9008	CF66_4052	GMP synthase; Catalyzes the synthesis of GMP from XMP.	tRNA(Met) cytidine acetyltransferase.	0.567
guaA	truB	CF66_9008	CF66_2110	GMP synthase; Catalyzes the synthesis of GMP from XMP.	tRNA pseudouridine synthase B; Belongs to the pseudouridine synthase TruB family.	0.963
infB	guaA	CF66_2112	CF66_9008	Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.	GMP synthase; Catalyzes the synthesis of GMP from XMP.	0.775
infB	nusA	CF66_2112	CF66_2113	Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.	Transcription elongation protein; Participates in both transcription termination and antitermination.	0.985
infB	rbfA	CF66_2112	CF66_2111	Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.	Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.	0.984
infB	rimP	CF66_2112	CF66_2114	Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.	Ribosome maturation factor; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.	0.932
infB	rps	CF66_2112	CF66_2251	Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.964
infB	rpsA	CF66_2112	CF66_2351	Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.	30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.	0.826
infB	truB	CF66_2112	CF66_2110	Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.	tRNA pseudouridine synthase B; Belongs to the pseudouridine synthase TruB family.	0.991
nusA	guaA	CF66_2113	CF66_9008	Transcription elongation protein; Participates in both transcription termination and antitermination.	GMP synthase; Catalyzes the synthesis of GMP from XMP.	0.515
nusA	infB	CF66_2113	CF66_2112	Transcription elongation protein; Participates in both transcription termination and antitermination.	Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.	0.985
nusA	rbfA	CF66_2113	CF66_2111	Transcription elongation protein; Participates in both transcription termination and antitermination.	Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.	0.798
nusA	rimP	CF66_2113	CF66_2114	Transcription elongation protein; Participates in both transcription termination and antitermination.	Ribosome maturation factor; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.	0.975
nusA	rps	CF66_2113	CF66_2251	Transcription elongation protein; Participates in both transcription termination and antitermination.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.789