Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
CF66_2265DNA repair ATPase. (145 aa)    
Predicted Functional Partners:
CF66_2263
Hypothetical protein.
 
    0.924
ccmH
Cytochrome c-type biogenesis protein H.
 
     0.898
cheW
Chemotaxis protein.
  
    0.857
cheZ
Chemotaxis phosphatase; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).
 
    0.829
parA
Replication initiation protein.
 
    0.810
flhF
Flagellar biosynthesis protein.
 
    0.785
CF66_2142
Hypothetical protein.
  
    0.777
ccmA
Cytochrome c biogenesis ATP-binding export protein; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family.
       0.776
ccmB
Heme exporter protein B.
       0.776
CF66_2356
Hypothetical protein.
  
     0.774
Your Current Organism:
Photodesmus katoptron
NCBI taxonomy Id: 28176
Other names: Anomalops katoptron symbiont, C. Photodesmus katoptron, Candidatus Photodesmus katoptron
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