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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccoQCytochrome c oxidase. (56 aa)    
Predicted Functional Partners:
ccoO
Cytochrome c oxidase subunit.
  
 
 0.991
ccoN
Cytochrome c oxidase subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.990
ccoP2
Cbb3-type cytochrome c oxidase subunit; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 0.980
CF66_2401
Hypothetical protein.
       0.691
ccoS
Cytochrome c oxidase maturation protein.
  
 
 0.688
cc4
Cytochrome c4.
  
 
 0.629
fixG
NADH:ubiquinone oxidoreductase subunit I.
  
    0.557
braZ
Branched-chain amino acid transport system 3 carrier protein.
       0.507
CF66_1015
Cytochrome c5.
    
  0.494
petC
Cytochrome c1.
   
 
  0.482
Your Current Organism:
Photodesmus katoptron
NCBI taxonomy Id: 28176
Other names: Anomalops katoptron symbiont, C. Photodesmus katoptron, Candidatus Photodesmus katoptron
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