Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ccoSCytochrome c oxidase maturation protein. (49 aa)    
Predicted Functional Partners:
CF66_2401
Hypothetical protein.
 
   
 0.928
braZ
Branched-chain amino acid transport system 3 carrier protein.
 
     0.915
ccoI
Cytochrome c oxidase biogenesis protein.
 
  
 0.904
ccoP2
Cbb3-type cytochrome c oxidase subunit; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
 
 0.834
ccoO
Cytochrome c oxidase subunit.
  
 
 0.802
ccoN
Cytochrome c oxidase subunit 1; Belongs to the heme-copper respiratory oxidase family.
    
 0.762
ccoQ
Cytochrome c oxidase.
  
 
 0.642
fixG
NADH:ubiquinone oxidoreductase subunit I.
 
  
 0.452
copA
Copper-translocating P-type ATPase.
  
  
 0.451
Your Current Organism:
Photodesmus katoptron
NCBI taxonomy Id: 28176
Other names: Anomalops katoptron symbiont, C. Photodesmus katoptron, Candidatus Photodesmus katoptron
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