Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
epsHGeneral secretion pathway protein H. (193 aa)    
Predicted Functional Partners:
epsJ
General secretion pathway protein J.
 
 0.996
epsK
General secretion pathway protein K.
 
 
 0.989
epsI
General secretion pathway protein I.
 
  
 0.980
epsL
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
  
 0.975
epsG
General secretion pathway protein G.
  
 
 0.953
epsM
General secretion pathway protein M.
 
   
 0.938
epsN
General secretion pathway protein N.
 
     0.937
epsE
General secretion pathway protein E.
  
 0.905
epsC
General secretion pathway protein C.
 
  
 0.897
epsF
General secretion pathway protein F.
  
  
 0.867
Your Current Organism:
Photodesmus katoptron
NCBI taxonomy Id: 28176
Other names: Anomalops katoptron symbiont, C. Photodesmus katoptron, Candidatus Photodesmus katoptron
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