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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
epsNGeneral secretion pathway protein N. (265 aa)    
Predicted Functional Partners:
epsM
General secretion pathway protein M.
 
   
 0.952
epsL
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
   
 0.935
epsH
General secretion pathway protein H.
 
     0.933
epsI
General secretion pathway protein I.
 
     0.929
epsJ
General secretion pathway protein J.
 
     0.908
epsC
General secretion pathway protein C.
 
   
 0.866
epsK
General secretion pathway protein K.
 
   
 0.866
CF66_2356
Hypothetical protein.
  
     0.769
ycnJ
Copper transport protein.
  
     0.765
CF66_2142
Hypothetical protein.
  
     0.763
Your Current Organism:
Photodesmus katoptron
NCBI taxonomy Id: 28176
Other names: Anomalops katoptron symbiont, C. Photodesmus katoptron, Candidatus Photodesmus katoptron
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