Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CF66_2142 | CF66_2265 | CF66_2142 | CF66_2265 | Hypothetical protein. | DNA repair ATPase. | 0.774 |
CF66_2142 | CF66_2356 | CF66_2142 | CF66_2356 | Hypothetical protein. | Hypothetical protein. | 0.774 |
CF66_2142 | atpI | CF66_2142 | CF66_6035 | Hypothetical protein. | ATP synthase protein I. | 0.654 |
CF66_2142 | fliJ | CF66_2142 | CF66_2032 | Hypothetical protein. | Flagellar protein. | 0.809 |
CF66_2142 | luxR | CF66_2142 | CF66_2090 | Hypothetical protein. | Transcriptional regulator. | 0.481 |
CF66_2265 | CF66_2142 | CF66_2265 | CF66_2142 | DNA repair ATPase. | Hypothetical protein. | 0.774 |
CF66_2265 | CF66_2356 | CF66_2265 | CF66_2356 | DNA repair ATPase. | Hypothetical protein. | 0.774 |
CF66_2265 | atpI | CF66_2265 | CF66_6035 | DNA repair ATPase. | ATP synthase protein I. | 0.736 |
CF66_2265 | fliJ | CF66_2265 | CF66_2032 | DNA repair ATPase. | Flagellar protein. | 0.773 |
CF66_2265 | luxR | CF66_2265 | CF66_2090 | DNA repair ATPase. | Transcriptional regulator. | 0.477 |
CF66_2265 | smpA | CF66_2265 | CF66_9002 | DNA repair ATPase. | Small protein A. | 0.601 |
CF66_2356 | CF66_2142 | CF66_2356 | CF66_2142 | Hypothetical protein. | Hypothetical protein. | 0.774 |
CF66_2356 | CF66_2265 | CF66_2356 | CF66_2265 | Hypothetical protein. | DNA repair ATPase. | 0.774 |
CF66_2356 | atpI | CF66_2356 | CF66_6035 | Hypothetical protein. | ATP synthase protein I. | 0.698 |
CF66_2356 | fliJ | CF66_2356 | CF66_2032 | Hypothetical protein. | Flagellar protein. | 0.774 |
CF66_2356 | luxR | CF66_2356 | CF66_2090 | Hypothetical protein. | Transcriptional regulator. | 0.535 |
CF66_2356 | smpA | CF66_2356 | CF66_9002 | Hypothetical protein. | Small protein A. | 0.455 |
atpB1 | atpE | CF66_6034 | CF66_6033 | ATP synthase subunit a 1; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | ATP synthase subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.999 |
atpB1 | atpF | CF66_6034 | CF66_6032 | ATP synthase subunit a 1; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | ATP synthase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. | 0.999 |
atpB1 | atpH | CF66_6034 | CF66_6031 | ATP synthase subunit a 1; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | ATP synthase subunit delta. | 0.999 |
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